All the Income Payment Challan details can be reconciled from one single menu known as Challan reconciliation.
To reconcile Challan details,
Go to Gateway of Tally > Display > Payroll Reports > Statutory Reports > Income Tax > Challan Reconciliation
Click on F5: Challan Reconcile or press F5 and set/alter the required Challan details.
Press Ctrl+A to save the changes.